SILA is a system for automated annotation of bacterial and archaeal genomes. It provides accurate gene prediction using a combination of tools (Prodigal and HGF) and a web site for task management and visualization of annotation.

This project is in alpha stage.

Please use the online service available at:
http://www.bioinfo.ufpr.br/SILA/login.jsp

Documentation (portuguese only):
http://hdl.handle.net/1884/34801

Features

  • Genome annotation
  • Gene prediction
  • Sequence comparison

Project Activity

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Categories

Bio-Informatics

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Additional Project Details

Operating Systems

Linux, Windows

Intended Audience

Science/Research

User Interface

Web-based

Programming Language

MATLAB, Java

Database Environment

MySQL

Related Categories

MATLAB Bio-Informatics Software, Java Bio-Informatics Software

Registered

2016-05-19
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