Open Source Mac Medical Software

A project to create an interactive, scientifically-accurate 3D model of the HIV virus. Particularly intended for use in education.

Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.

BlochLib is an expression template library of generic data structures and algorithms to perform large scale nuclear magnetic resonance classical and quantum mechanical spin simulations, with many I/O capabilities,and integrated numerical routines.

Comprehensive Meta Prediction and Annotation Services for Proteins: The new all-in-one prediction tool that can be easily extended to include any SOAP/WSDL-enabled prediction servers. A concise user interface lets you use the results instantly.

*** Please note this repository is now deprecated as of January 2018. All EFO development and source code has been moved to https://github.com/EBISPOT/efo *** The Experimental Factor Ontology (EFO) available from http://www.ebi.ac.uk/efo is an application focused ontology modeling the experimental factors in ArrayExpress and constructing mappings to multiple existing domain specific ontologies. To submit new terms, features or report bugs please submit a ticket at the following: http://www.ebi.ac.uk/panda/jira/secure/CreateIssue!default.jspa

Matlab software for analysis of skin conductance data (SC; viz., electrodermal activity, EDA; galvanic skin response, GSR). Data decomposition and scientific analysis based on deconvolution approach. Various functions via GUI or batch-mode.

This software is a tool for measurement kyphosis, lordosis and scoliosis. LoB Analytics was developed in Python.

This Matlab toolbox runs a GLM on graph theoretic network properties in brain networks. The GLM accepts continuous & categorical between-participant predictors and categorical within-participant predictors. Significance is determined via non-parametric permutation tests. The toolbox allows testing of both fully connected and thresholded networks (based on a range of thresholds). The toolbox also provides a data processing path for resting state fMRI data. Several options for partialing nuisance signals are available, including local and total white matter signal (Jo et al., 2013), calculation of Saad et al. (2013)'s GCOR, and the use of Chen et al. (2012) GNI method to determine whether global signal partialing is needed. In addition, Power et al. (2014)'s motion scrubbing method is available.

MediGrid is the open source model for proper documentation and utilization of medical algorithms. The project is solved at the Faculty hospital in Prague Motol.

A matlab model of the neonatal rat cardiac action potential

ONTODerm is a specialty specific ontology for dermatology to integrate dermatology with medical software systems.

In randomised controlled trials, interventions may have several components. This simple program will enable you to depict any randomised trial graphically It will standardise the construction process and ensure every step is covered. For more information

Moved to: http://parkermills.github.io/phagetherapy/

While resting-state fMRI is drawing more and more attention, there has not been a software for its data analysis. Based on MATLAB, we developed a package named REST. Currently REST has three main functions: function connectivity, ReHo and ALFF.

This project aims to make open source tools for medical Studies of Diagnostic Accuracy, wich are neglected by most commom statistical tools. Most tools will be based on the STARD.

The rapid accumulation of human mutation data has led to the idea of establishing a national/ethnic database in Turkey endorsed by HUGO-MDI/HGVS. The interdisciplinary hmut-tr project initiated in 1995 aims to host this valuable data and information.

A tool set for registering and statistically analyzing medical images with special focus on the human skeleton.

This project provides visual interactive interfaces to custom algorithms used in genomes research.