Search Results for "slurm"
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Showing 13 open source projects for "slurm"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Stop Storing Third-Party Tokens in Your DatabaseRolling your own OAuth token storage can be a security liability. Token Vault securely stores access and refresh tokens from federated providers and handles exchange and renewal automatically. Connected accounts, refresh exchange, and privileged worker flows included.
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Fast3R
Fast3R: Towards 3D Reconstruction of 1000+ Images in One Forward Pass
Fast3R is Meta AI’s official CVPR 2025 release for “Towards 3D Reconstruction of 1000+ Images in One Forward Pass.” It represents a next-generation feedforward 3D reconstruction model capable of producing dense point clouds and camera poses for hundreds to thousands of images or video frames in a single inference pass—eliminating the need for slow, iterative structure-from-motion pipelines. Built on PyTorch Lightning and extending concepts from DUSt3R and Spann3r, Fast3R unifies multi-view... -
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AWS ParallelCluster Cookbook
The Chef cookbook used to build and bootstrap AWS ParallelCluster
...Built on the Open Source CfnCluster project, AWS ParallelCluster enables you to quickly build an HPC compute environment in AWS. It automatically sets up the required compute resources and a shared filesystem and offers a variety of batch schedulers such as AWS Batch and Slurm. AWS ParallelCluster facilitates both quick start proof of concepts (POCs) and production deployments. You can build higher-level workflows, such as a Genomics portal that automates the entire DNA sequencing workflow, on top of AWS ParallelCluster. Node.js is required by AWS CDK library used by ParallelCluster. -
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AWS ParallelCluster Node
Python package installed on the Amazon EC2 instances
...Built on the Open Source CfnCluster project, AWS ParallelCluster enables you to quickly build an HPC compute environment in AWS. It automatically sets up the required compute resources and a shared filesystem and offers a variety of batch schedulers such as AWS Batch and Slurm. AWS ParallelCluster facilitates both quick start proof of concepts (POCs) and production deployments. You can build higher-level workflows, such as a Genomics portal that automates the entire DNA sequencing workflow, on top of AWS ParallelCluster. -
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Likwid
Performance monitoring and benchmarking suite
Likwid is a simple to install and use toolsuite of command line applications and a library for performance oriented programmers. It works for Intel, AMD, ARMv8 and POWER9 processors on the Linux operating system. There is additional support for Nvidia and AMD GPUs. There is support for ARMv7 and POWER8/9 but there is currently no test machine in our hands to test them properly. -
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Amplicon_Sequencing_Worfklow
Analyzing amplicon data from sequences to stats
...All you need is to have the latest version of R installed, some experience with the command line & shell, and enough memory to run all of the programs. There are also instructions provided in case you are running these analyses via a computing cluster/Slurm workload manager. You can choose to go through the workflow using either an Rmd script, an html file, or a PDF, or via the homepage link provided. If you have questions or concerns, please don't hesitate to reach out. Thanks! -
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Catalyst
Accelerated deep learning R&D
Catalyst is a PyTorch framework for accelerated Deep Learning research and development. It allows you to write compact but full-featured Deep Learning pipelines with just a few lines of code. With Catalyst you get a full set of features including a training loop with metrics, model checkpointing and more, all without the boilerplate. Catalyst is focused on reproducibility, rapid experimentation, and codebase reuse so you can break the cycle of writing another regular train loop and make... -
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Distributed MultiThreaded Checkpointing
Checkpoint/Restart functionality for Linux processes
...The OpenGL library for 3D-graphics is supported through a special plugin. It also has strong support for HPC (High Performance Computing) environments, including MPI and SLURM, through the github MANA project: https://github.com/mpickpt/mana -
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slurm-roll
Slurm Resource Manager for Rocks Clusters
Slurm is a replacement for other resource management software and schedulers like gridengine or torque. The slurm roll integrates very well into a rocks clusters installation. In the folder addons, there are a lot of useful rolls for rocks clusters 6.1 and 6.2. These rolls do not depend on slurm. Please see Discussion for further information and support -
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Meraculous-2D
Eukaryotic Genome Assembler
...The assembly is driven by a perl pipeline which performs data fragmentation and load balancing, as well as submission and monitoring of multiple task arrays on a GE/SLURM-type cluster or a standalone multi-core server. Manuscripts in submission: https://arxiv.org/abs/1703.09852 https://arxiv.org/abs/1608 -
Gemini 3 and 200+ AI Models on One PlatformBuild generative AI apps with Vertex AI. Switch between models without switching platforms.
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SPANDx
Comparative analysis of haploid next-generation genome sequence data
...A presence/absence matrix is also generated to allow you to identify the core/accessory genome content across all your genomes. The outputs generated by SPANDx can be imported into PLINK for microbial genome-wide association study (mGWAS) analyses. SPANDx can utilise PBS, SGE or SLURM for resource management. SPANDx can also run directly on the command line if no resource manager is available. For the most up-to-date version of SPANDx, check us out on GitHub: https://github.com/dsarov/SPANDx -
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NOTE: NEWEST FILES AT http://www.schedmd.com/#repos ---------------------------------------------------------------------------------------------------------------------------- SLURM is an open-source resource manager designed for Linux clusters.
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Ganglia Job Monarch
Batch system monitoring and archiving
Job Monarch is an addon to the Ganglia Monitoring System that provides batch job monitoring and archiving plus a graphical overview of clusters and assorted batch systems. Fully supported batch system: Torque, PBS and SLURM. Experimental: LSF, SGE -
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AUKS is an utility designed to ease kerberos V credential support addition to non-interactive applications, like batch systems (LSF,Torque,...) or resource managers (Slurm,...). It includes a plugin for SLURM resource manager.
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