Search Results for "protein folding"

...The tutorials cover a broad range of topics—from foundational Python programming and data handling to supervised, unsupervised, and reinforcement learning, as well as graph neural networks and scientific reasoning. Specialized notebooks also explore creative AI applications, language modeling, generative models, and protein folding. Each tutorial is designed to be standalone and adaptable for self-study, classroom teaching, or use at summer schools and community workshops.

TI2BioP allows mainly the calculation of topological indices (spectral moments) derived from inferred and artificial 2D structures of DNA, RNA and proteins being possible to carry out a structure-function correlation irrespective of sequence alignments. TI2BioP version 3.0 is a python platform with a graphical interface designed for Windows, Linux and Mac OS.

...Spende einen Cappuccino: Bitcoin: 1HqrdnfQgi9B4LW8UEvLAwh7X5gXPCoQ5B Litecoin: Lbo2jxD85ymyq5167r7yFVZkEr73F2h44B Paypal: paypal.me/GerritLeder Credits ====== Principle Investigator -------------------------- Gerrit Leder: protein folding algorithm design and testing, and initial implementation in Eiffel. Eiffel Consultant --------------------- Finnian Reilly: Eiffel code optimization and parallel processing adaptation. www.hex11software.com finnian at eiffel hyphen loop dot com

Protein structure and folding model released under the AGPL

The C Protein Folding Library is a minimalistic, high-performance modular library of C functions and data structures for computing folding simulations of proteins on a wide variety of computer hardware.

The project implements Protein Folding on a CBE. The role of water on folding under different environments is studied through visualization results. It acts as a tool to visualize the folding of an amino acid sequence into a 3D protein structure.

This application allows users to interactively fold proteins, and to visualize various folding patterns of proteins on mathematical lattice structures. Owner: Christopher Michael Maloney (surfwave3@gmail.com)

A simple Folding@Home monitoring app for Linux. Written in Python and using Pygtk for the UI, Protein Think gets the job done without too much fuss.

Library Of Randomized Algorithms: Randomization is a powerful idea has applications in science and engineering. Difficult optimization problems, protein folding and data mining are only a few of the problems that have been solved using randomization.

Protein Folding by Genetic Algorithms uses evolutionary computing methods to predict a tertiary protein conformation using only the known aminoacid sequence of the protein.

OOPS means Open Protein Simulator, it is a program designed to serve as a test bed for different algorithms for protein folding, dynamics and structure prediction. OOPS is based on a plugin architecture that makes it highly modular and extensible.

ea-fold is a platform to perform protein folding simulations by means of evolutionary algorithms. The program implements a parallelized distributed evolutionary algorithms and a flexible force field.

simple gl based game that bares a resemblence to the protein folding.