Search Results for "hydrogen"
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Showing 54 open source projects for "hydrogen"
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Hydrogen
An advanced drum machine with pattern-based programming
Hydrogen is an advanced drum machine for GNU/Linux, Windows and Mac OS X. It's main goal is to bring professional yet simple and intuitive pattern-based drum programming. -
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HomotopyContinuation.jl
A Julia package for solving systems of polynomials
...Homotopy continuation methods allow us to study the conformation space of molecules as for example cyclooctane (CH₂)₈. This molecule consists of eight carbon atoms aligned in a ring, and eight hydrogen atoms, each of which is attached to one of the carbon atoms. -
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Hydrogen Bond Analysis Tool (HBAT)
HBAT 2 is migrated from PERL to Python.
HBAT(Hydrogen Bond Analysis Tool) is a tool to automate the analysis of hydrogen bonds present in a PDB Structure file. HBAT 2 is migrated from PERL to Python. Latest Documentation: https://hbat.abhishek-tiwari.com/ Web Server Version: http://hbat-web.abhishek-tiwari.com Latest Github Release: http://github.com/abhishektiwari/hbat Citation: Tiwari, A., & Panigrahi, S. -
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Hex
Hydrogen-Electron Collisions
A computer code for simulation of electron-hydrogen scattering. Contains three (more or less) finished sub-programs: (a) “hex-ecs” which solves the Schrödinger equation in the B-spline basis, (b) “hex-dwba” which computes scattering variables for high energies using the distorted wave Born approximation of the first order and finally (c) “hex-db” which is a user interface to a plain SQLite database, where the intermediate results are being stored, and which is used to extract derived quantities like a cross section from it. ... -
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We developed IBEIP, an intelligent and accurate tool for identifying B cell dominant epitope regions based on Ag-nAb complex crystal structures from PDB database. During epitope mapping, IBEIP analyzes four molecular interactions (van der Waals forces, buried surface area, hydrogen bonds, and electrostatic interactions) between antigen and antibody complexes to ensure accuracy. IBEIP uses a hierarchical iterative merging model to merge highly overlapping epitopes and identify the hot nAb binding region as the B cell dominant epitope region. IBEIP is also applicable to analyzing high-mutant antigens and complex epitope structures that span adjacent monomers. ...
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GromacsProSuite
Graphical User Interface for Gromacs
...Built-in monitoring tracks CPU, RAM, and disk usage to ensure stable performance during parallel processing. Beyond simulation execution, it includes advanced trajectory processing and analysis tools such as RMSD, RMSF, SASA, clustering, PCA, hydrogen-bond analysis, Ramachandran plots, and FEL mapping. With integrated visualization and plotting utilities, it offers a unified platform for researchers, educators, and students to perform complete MD workflows efficiently and reproducibly. Our Goal is to bring MD simulations to every biologist's toolkit. -
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Book-Reviews-In-Mathematica
Partial Differential Equations, Complex Analysis, Mathematica, Farlow
Cliff* Notes, Mathematica Evaluatable "Partial Differential Equations for Scientists and Engineers", Farlow "Physics for Scientists and Engineers", Serway "A First Course in Complex Analysis", Beck "PDE", Asmar "PDE, An Introduction", Colton "Elementary Differential Equations", 7th, Rainville "Ordinary Differential Equations", Tenenbaum "Linear Algebra And It's Applications", Lay "Swokowski Calculus", 5th, Swokowski "Chemistry Concepts & Problems, A Self-Teaching Guide", Houk "Openstax Chemistry" "College Algebra and Trigonometry", 2nd, Kaufman * 2nd order cannonicalization SOLVER, cannonical form automatically * nth order PDE to System of n first order PDE matrices generator with ODE Decouple Solving (pde not yet) * radial probability plot for Hydrogen, pde shrodinger's * Planck blackbody, Rutherford essay * fermi free electron essay * Table of Nucleon positions for all Isotope w/Manipulate * p-p separation nucleus plot using the above -
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Hydrogen
Run code interactively, inspect data, and plot
Hydrogen is an interactive coding environment that supports Python, R, JavaScript and other Jupyter kernels. Hydrogen was inspired by Bret Victor's ideas about the power of instantaneous feedback and the design of Light Table. Running code inline and in real-time is a more natural way to develop. By bringing the interactive style of Light Table to the rock-solid usability of Atom, Hydrogen makes it easy to write code the way you want to. -
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Pearl Studio 9
A Loaded Recording Studio Out of the box
64 bit LTS OS running the 5.4 kernel. -
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CheUP
Gromacs Topology Builder - OPLS AA Based. Support many charge model
...Calculate CM1A – LBCC and CM5 Charge Model 4. Read many files formats structure using Open Babel library and Quantum Output (MOPAC7.1, ORCA, GAUSSIAN, FIREFLY) 5. Nice Ways Adding Hydrogen -
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Pearl MATE STUDIO 7.1
Ready to go Professional Multitrack Recording by MixBus on MATE
This release features the new MixBus multitrack recording software that turnes your Linux Desktop into a full featured audio recording studio. Based on 64 bit Pearl MATE 7 series (18.04 LTR), Finally professional software used by the pros on Linux for everyone. Harrison MixBus software is based on the popular Ardour Multitrack Open Source Software. This version is the demo version. ALSA and JACK support. Candence handles the seamless use of Pulseaudio for such software like Firefox... -
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The openFuelCell project is a forum to develop open source computational fluid dynamics (CFD) software to model fuel cells. Fuel cells http://en.wikipedia.org/wiki/Fuel_cell are devices that convert hydrogen and oxygen to water and electricity, and are promising renewable energy conversion devices. Computational fluid dynamics tools are used to size and rate fuel cell systems. OpenFoam is an open source CFD toolbox, available for downloading at http://www.openfoam.com/, written in C++ and conforming to the object-oriented paradigm.
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HaDeX
Tools for processing, analysis and visualization of HDX-MS experiments
Tools for processing, analysis and visualization of Hydrogen Deuterium eXchange monitored by Mass Spectrometry experiments (HDX-MS). HaDeX introduces a new standardized and reproducible workflow for the analysis of the HDX-MS data, including novel uncertainty intervals. Additionally, it covers data exploration, quality control and generation of publication-quality figures. All functionalities are also available in the HaDeX web server (http://mslab-ibb.pl/shiny/HaDeX/) or the HaDeX R package. -
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📝 MIUI Evolution is a project developed by Gerimis and Kenzo ID Team. 📝 Porting MIUI Nougat from device Hydrogen (Mi Max) or Helium (Mi Max Prime) to Kenzo (Redmi Note 3 Pro) 📌 Website: http://bit.ly/MIUI-Evolution 🍺 Special Thanks: 👤 Mank Abo 👤 Mr. Jopra 👤 Sego Pecel 👤 Badroen Solo 👤 Ezhasuke 👤 M. Taupik 👤 Turaturu 👤 Eni Wulandari 👤 Vickry 👤 Eka Restu A Putra 👤 BadjinganGuy 👤 Khusnan 👤 Bian 👤 Mon's Semar Mesem 👤 MIUI Kenzo ID Team 👤 MiFans Indonesia 👤 Xiaomi Redmi Note 3 Pro User 👤 Etc
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ElemenTable - Periodic Table
Simple colored and interactive Periodic Table of Elements
ElemenTable is a colorful periodic table of elements application for Windows (requires .NET Framework v.4.5 or higher). It gives many important information, e.g. atomic mass or electronegativity, about all current chemical elements from Hydrogen [1] to Oganesson [118]. All elements are ordered in a colorful periodic table layout which can be changed in color to show either the element groups, the element states or the element types. The data of the chemical elements is hosted at https://github.com/bluegrams/Periodica.Data. Also have a look at the new periodic table app for Windows 10 with many more features at https://www.microsoft.com/store/apps/9PB2TD7P6DT3. -
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AmberAnalysis
Command-line tools for analyzing Amber Molecular Dynamics simulations.
...Can detect the position of a planar interface between two substances and plot density relative to that interface for atoms of an arbitrary type, name, charge, or residue. Orientation of three-atom residues (such as water) may be calculated and plotted. Uses parallel processing to detect hydrogen bonds, and can produce a bonding profile. Output files can be displayed as graphs using the included matplotlib python graphing script. -
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hdxworkbench
HD Exchange Data analysis
HDX WORKBENCH IS AN INTEGRATED SOFTWARE PLATFORM DESIGNED SPECIFICALLY TO ENHANCE THE ANALYSIS OF HYDROGEN/DEUTERIUM EXCHANGE (HDX) MASS SPECTROMETRY DATA. BUILDING UPON THE EXPERIENCE FROM DEVELOPMENT OF THE DEUTERATOR AND HD DESKTOP, IT INTEGRATES TOOLS FOR DATA EXTRACTION WITH VISUALIZATION COMPONENTS WITHIN A SINGLE DESKTOP APPLICATION. THE SOFTWARE HAS BEEN DESIGNED TO BE A COMPREHENSIVE SOLUTION, AND EMPHASIS WAS PLACED ON ACHIEVING THREE MAIN GOALS OF INCREASED ANALYSIS SPEED; USER-FRIENDLY GRAPHIC INTERFACE; AND STRONG SUPPORT FOR LARGE HDX DATA SETS. ... -
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Hydrogen/Core51 is a Keil C51 None-Preemptive OS. CORE written by Pure C (well..almost Pure, has 10 lines inline ASM). CORE minimal resource **Size about 2.3~5K ROM, 20+ Byte RAM. it is depends modules your chosen. **CORE also TAKE TIMER0 to tick for real-timing, and need xdata for HEAP CORE Support **dynamic Create/Terminate Thread(TASK) **Synchronize Object (Event / Semaphore / Critical Section), Thread(TASK) Naturally GIVES UP CPU by WaitFor these Synchronize Object **Common IO, it is STD C open/read/write in Any Stream Like IO(I2C, UART etc.) ...
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Pearl Linux 3.5
OS X Alternative that installs on most new or old computers
The complete OS X styled operating system ready to go with the best open source software available today. Pearl Linux 3.5 32 bit will install on most new and used desktops, laptops, notebooks and netbooks. All of the Pearl Linux releases are modeled from Mac OS X Snow Leopard addition. Newer OS X styles available through theming. Customize this super stable feature packed Mac OS X styled system with compiz desktop effects with both dark and light themes, Nitrogen to change your HD... -
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ddtFoam
OpenFOAM solver to simulate the deflagration-to-detonation transition
This solver represents an addition to the open-source CFD package OpenFOAM. The solver is used to simulate the deflagration-to-detonation transition in hydrogen-air mixtures. Prominent features are described below. Additional description is available in the pdf file included. For a more detailed description download Florian Ettner's thesis (in German) from http://www.td.mw.tum.de/tum-td/de/forschung/dissertationen/download/I2013/Ettne13.pdf [8.6 MB] A shorter description (in English) can be found in the following publiction: http://www.hindawi.com/journals/jc/2014/686347/ -
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bnf2xml
simple BNF parser makes xml markup of matches
...bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find needle in haystack and what to show, ie: <alph> ::= a | b | c | d ... <word> ::= <alph>+ bnf2xml is a top down recursive parser. Unlike buttom up parsers like gcc(1) or some top downs, bnf2xml is completely unambiguous / resolves ALL conflicts. Slower on ave. for parsing C or than sed(1) for simple searches. ... -
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Rockband Pro-Drumkit midi driver
Package to use RockBand 3 Pro Drumkit and Guitar Hero drumkit via midi
FOR LATEST VERSION GO TO https://github.com/rbdrum2midi/rbdrum2midi This userland program uses libusb to gain access to the velocity sensitive data in the rockband 3 wireless usb prodrum controller (with cymbals) and Guitar Hero drumkit and use it as an ALSA MIDI controller. It has a low latency setup so that it can give a fairly good drumming experience. -
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Fluid Gravity 3way
there are 3 observers to every curve, each seeing the other 2
I recently dug up some of my old simulations after to my surprise 3SAT and a theoretical expansion of boltzmann statistics reminded me I already simulated something like that but I didnt know how good a simulation it was. Check how the varying density and shape of electron clouds and soliton-like or fluid drop like blobs of field gradually start to point outward and get thinner, like a soliton is bell curve shaped as seen from outside. More importantly, compare the 2 halfs of electron cloud... -
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Bingul Project
Bingul project is for Tubitak Electrical and Hydrogen Cars
Bingul project includes embedded and c++ files to control and monitor remote car datas at racing. Usually most of team have not got a communication system so i believe this project solve them problems.
