Showing 12 open source projects for "blat"

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  • Everything Your Small Business Needs to Succeed | Connecteam Icon
    Everything Your Small Business Needs to Succeed | Connecteam

    Connecteam is an award-winning all-in-one employee management solution for daily operations, communications, and human resource management.

    Easily engage and manage non-desk employees with Connecteam’s mobile-first platform that helps improve communication, enhance daily processes and increase productivity with custom checklists, forms, and reports. Schedule shifts and track accurate work hours with Connecteam’s automated GPS time clock and easily export approved timesheets to payroll. Connecteam helps you keep your employees sharp thanks to knowledge base centers and advanced training courses. Raise morale with employee recognition rewards and keep the entire company updated through the main news feed.
  • Cloudflare secures and ensures the reliability of your external-facing resources such as websites, APIs, and applications. Icon
    It protects your internal resources such as behind-the-firewall applications, teams, and devices.
  • 1
    Blat - Windows Command Line SMTP Mailer
    Blat - A Windows (32 & 64 bit) command line SMTP mailer. Use it to automatically eMail logs, the contents of a html FORM, or whatever else you need to send.
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    Downloads: 841 This Week
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  • 2

    MITP

    MITP - conserve & novel miRNA identification & target prediction tool

    miRNA is a widely known small non-coding RNA which can mediate gene regulation of most important biological processes in plants and animals. Therefore, identification conserve and novel miRNA and their target genes in model and new sequenced species are inevitable. MITP is designed to identify miRNA easily and faster based on sequence mapping result from any mapping software which producing SAM format output result, blast result (default output result) or blat result (default output result...
    Downloads: 0 This Week
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  • 3

    ExonFinder

    A pipeline to extract novel cassette exons/retained-introns

    ExonFinder provides a pipeline to extract novel cassette exons and novel retained-introns from the results of mapping cross-species ESTs against a target genome via blat.
    Downloads: 0 This Week
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  • 4

    backupmssql

    Dumps your MSSQL to local and/or remote storage

    A little script which uses sqlcmd to dump an online MSSQL instance with every database it contains and write the output to local disk. By using robocopy, the dump is copied to a CIFS share. There is another script which writes output direct to CIFS. Requirements: sqlcmd.exe which should be on your sql server, robocopy and blat for email.
    Downloads: 0 This Week
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  • Cyber Risk Assessment and Management Platform Icon
    Cyber Risk Assessment and Management Platform

    ConnectWise Identify is a powerful cybersecurity risk assessment platform offering strategic cybersecurity assessments and recommendations.

    When it comes to cybersecurity, what your clients don’t know can really hurt them. And believe it or not, keep them safe starts with asking questions. With ConnectWise Identify Assessment, get access to risk assessment backed by the NIST Cybersecurity Framework to uncover risks across your client’s entire business, not just their networks. With a clearly defined, easy-to-read risk report in hand, you can start having meaningful security conversations that can get you on the path of keeping your clients protected from every angle. Choose from two assessment levels to cover every client’s need, from the Essentials to cover the basics to our Comprehensive Assessment to dive deeper to uncover additional risks. Our intuitive heat map shows you your client’s overall risk level and priority to address risks based on probability and financial impact. Each report includes remediation recommendations to help you create a revenue-generating action plan.
  • 5

    GKas

    The pipeline for Genome level Ka/Ks calculation

    GKas is a codon-aware DNA alignment program, which is developed based on several programs from three widely used packages: BLAT, BLASTALL (including bl2seq, formatdb and fastacmd) and PAML (including codeml). GKas can automatically detect and eliminate frame-shift mutations and premature stop-codons to compute the substitution rates (Ka, Ks and Ka/Ks) between a well-annotated genome and a non-annotated genome or even a non-well assembled scaffold data set. It is especially useful for the newly...
    Downloads: 0 This Week
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  • 6
    BFAST facilitates the fast and accurate mapping of short reads to reference sequences, where mapping billions of short reads with variants is of utmost importance.
    Downloads: 0 This Week
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  • 7
    NumericalFISH is a bioinformatics graphical tool for easy analysis of BLAST or BLAT results, especially aimed at the study of duplications or segmental duplications.
    Downloads: 0 This Week
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  • 8
    Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
    Downloads: 0 This Week
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  • 9
    FusionMiner
    FusionMiner is a molecular biology program which accepts genomic alignments in BLAST/BLAT tabular output and attempts to find true fusion transcripts. A single command runs the pipeline and generates results.
    Downloads: 0 This Week
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  • RMM Software | Remote Monitoring Platform and Tools Icon
    RMM Software | Remote Monitoring Platform and Tools

    Best-in-class automation, scalability, and single-pane IT management.

    Don’t settle when it comes to managing your clients’ IT infrastructure. Exceed their expectations with ConnectWise RMM, our MSP RMM software that provides proactive tools and NOC services—regardless of device environment. With the number of new vulnerabilities rising each year, smart patching procedures have never been more important. We automatically test and deploy patches when they are viable and restrict patches that are harmful. Get better protection for clients while you spend less time managing endpoints and more time growing your business. It’s tough to locate, afford, and retain quality talent. In fact, 81% of IT leaders say it’s hard to find the recruits they need. Add ConnectWise RMM, NOC services and get the expertise and problem resolution you need to become the advisor your clients demand—without adding headcount.
  • 10
    Semplice interfaccia GUI intuitiva che invia posta elettronica facendo uso di Blat da riga di comando. L'applicazione è sviluppata per windows in Visual Basic 6.
    Downloads: 0 This Week
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  • 11
    blat(mat) is a Braille to print translator for maths. It takes a Spanish Six-dot Mathematical Braille (not Nemeth Code) text and converts it to an HTML file ready to be translated into XHTML+MathML by ASCIIMathML (javascript).
    Downloads: 0 This Week
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  • 12
    Matt's FormMail is a customizable form to email perl script which unlike most other formmail scripts that I have seen or used, it handles its own SMTP procedures, contacting the SMTP server manually and hence removing the need for a program such as blat/
    Downloads: 0 This Week
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