Jörg Hakenberg

I believe NHI's PubMed XML output might have changed, that's why we're getting the Exception. We don't have a build script :( --- what errors are you getting?

GnatService.sh won't start

Thanks for filing this issue. Let me take a look and update the binary downloads + example scripts.

Thanks for pointing this out! I committed a code fix to Sourceforge but still need to generate new binaries for people to download if they are not working off the source code. Thanks again, Joerg On Sat, Nov 18, 2017 at 6:35 PM, Kuni Katsuya kczi@users.sf.net wrote: [tickets:#3] https://sourceforge.net/p/gnat/tickets/3/ NullPointerException from TextProcessor.getEnglishWordTokens()* Status: open Milestone: 1.0 Labels: bug Created: Sun Nov 19, 2017 02:35 AM UTC by Kuni Katsuya Last Updated: Sun Nov...

NullPointerException from TextProcessor.getEnglishWordTokens()

NullPointerException from TextProcessor.getEnglishWordTokens()

Fixed in source code; still need to re-up new binaries.

getEnglishWordTokens would throw an exception when the text was NULL: in this case, from a DB entry for a gene that simply had no Entrez Gene Summary, that is, the gene did exist but the value for 'summary' was NULL in the DB.