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| Name | Modified | Size | Downloads / Week |
|---|---|---|---|
| Parent folder | |||
| picard-tools-1.75.zip | 2012-08-13 | 35.6 MB | |
| README.txt | 2012-08-13 | 837 Bytes | |
| Totals: 2 Items | 35.6 MB | 0 | |
Picard release 1.75 13 August 2012 - Added method to make a read unmapped and a method to check whether any cigar element consumes both read and reference bases to SAMUtils; used these methods in AbstractAlignment merger to catch reads with cigar strings that don't consume any read or reference bases (e.g. all soft-clipped) and make them unmapped - Augmented plots for GC Bias Metrics, Mean Quality by Cycle, Quality Score Distribution, and RNA Sequence Coverage. Specifically, if the plot was generated from a read group .bam, the title of the plot includes the read group's library. - IlluminaDataProvider.java: Produce more useful error output by printing out the class of the parser that's failing - Support SeekableStream BAM index. - build.xml: Added single-jar packaging target tasks. Consolidated package-commands task.
