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Name	Modified	Size	InfoDownloads / Week
Parent folder
picard-tools-1.44.zip	2011-04-25	9.9 MB	0
README.txt	2011-04-25	535 Bytes	0
Totals: 2 Items		9.9 MB	0

Picard release 1.44
24 April 2011

- Fix bug in SeekableFileStream.  read() should return -1 if nothing could be read due to EOF.  Fix courtesy of Matt Mead.

- Added new programs IlluminaBasecallsToSam, ExtractIlluminaBarcodes, and supporting classes, utilities, and tests.  ExtractIlluminaBarcodes reads Illumina data and selects the best-matching molecular barcode for each read.  IlluminaBasecallsToSam converts Illumina data into SAM format.

- MarkDuplicates.java: Do not consider non-primary alignments as potential duplicates.

Source: README.txt, updated 2011-04-25

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