Tests on "neutrality" are designed to detect systematic deviations from chance patterns in genetic data. This tool computes for a given SNP site frequency spectrum some standard test statistics like Tajima's D, Fay & Wu's H, etc. Additionally, the user may adapt the tests to specific demographies by specifying non-standard first and secondary moments. These can be obtained e.g. from simulations.

Project Activity

See All Activity >

Categories

Simulation, Bio-Informatics, Statistics

License

GNU General Public License version 3.0 (GPLv3)

Follow ntx

ntx Web Site

Other Useful Business Software
99.99% Uptime for MySQL and PostgreSQL on Google Cloud Icon
99.99% Uptime for MySQL and PostgreSQL on Google Cloud

Enterprise Plus edition delivers sub-second maintenance downtime and 2x read/write performance. Built for critical apps.

Cloud SQL Enterprise Plus gives you a 99.99% availability SLA with near-zero downtime maintenance—typically under 10 seconds. Get 2x better read/write performance, intelligent data caching, and 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server with built-in vector search for gen AI apps. New customers get $300 in free credit.
Try Cloud SQL Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of ntx!

Additional Project Details

Operating Systems

BSD, Linux

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

C++

Related Categories

C++ Simulation Software, C++ Bio-Informatics Software, C++ Statistics Software

Registered

2012-11-07
Report inappropriate content