miRge3 Files

Comprehensive analysis of small RNA sequencing data

Status: Alpha

Brought to you by: halushka-lab

The interactive file manager requires Javascript. Please enable it or use sftp or scp.
You may still browse the files here.

Name	Modified	Size	InfoDownloads / Week
Parent folder
mirge3-0.0.2.tar.gz	2020-11-03	474.1 kB	0
dev0.0.2.tar.gz	2020-11-03	5.5 MB	0
dev0.0.2.zip	2020-11-03	5.5 MB	0
README.md	2020-11-03	223 Bytes	0
Totals: 4 Items		11.5 MB	0

This release supports Python3 and has improved performance along with advanced graphics with additional features for processing small RNA data.

Change log: Included manifest file to include files other than *.py

Source: README.md, updated 2020-11-03

Other Useful Business Software

Cut Cloud Costs with Google Compute Engine

Save up to 91% with Spot VMs and get automatic sustained-use discounts. One free VM per month, plus $300 in credits.

Save on compute costs with Compute Engine. Reduce your batch jobs and workload bill 60-91% with Spot VMs. Compute Engine's committed use offers customers up to 70% savings through sustained use discounts. Plus, you get one free e2-micro VM monthly and $300 credit to start.

Try Compute Engine

Cut Data Warehouse Costs up to 54% with BigQuery

Migrate from Snowflake, Databricks, or Redshift with free migration tools. Exabyte scale without the Exabyte price.

BigQuery delivers up to 54% lower TCO than cloud alternatives. Migrate from legacy or competing warehouses using free BigQuery Migration Service with automated SQL translation. Get serverless scale with no infrastructure to manage, compressed storage, and flexible pricing—pay per query or commit for deeper discounts. New customers get $300 in free credit.

Try BigQuery Free

Recommended Projects

sRNAWorkbench
The UEA sRNA Workbench
CupidTool
Cupid: simultaneous reconstruction of miRNA-target and ceRNA networks
miRDeep-P
miRDeep-P,miRDP for short, is a computational tool for analyzing the microRNA (miRNA) transcriptome in plants.
SRICATs
MicroRNAs (miRNAs) are of significance in tuning and buffering gene expression. Despite abundant analysis tools have been developed in the last two decades, plant miRNA identification from next-generation sequencing (NGS) data remains challenging. Here present a user-friendly pure Java-based software package, SRICATs, which enable researchers to perform all steps of plant miRNA analysis based on convolutional neural network methods. SRICATs outperforms currently popular software tools on the test data from five plant species: Oryza sativa, Arabidopsis thaliana, Sorghum bicolor, Chlamydomonas reinhardtii and Physcomitrella patens.
miRDP2
Accurately and fast analyzing microRNAs transcriptome in plants

miRge3 Files

Comprehensive analysis of small RNA sequencing data

Get an email when there's a new version of miRge3

This release supports Python3 and has improved performance along with advanced graphics with additional features for processing small RNA data.

Change log: Included manifest file to include files other than *.py