MetaMIS is the first tool to automatically infer the microbial interactions of microbial community profile in the field of metagenomics. The most distinguished feature of MetaMIS is its ability to retain maximum population of rare species in an ecological interactive network. MetaMIS provides a user-friendly interactive stand-alone graphical interface for scientists without programming skills to investigate the interactions among microorganisms.

2017.03.09 MetaMIS_v1.02:
- Create an option to export consensus table.
- Decimal time is allowed.

2016.12.16 MetaMIS_v1.01:
- fix the memory-out problem for larger abundance table (>500 OTUs).
- add three items to constrain the total number of running interaction networks

2016.11.17 MetaMIS_v1

Features

  • Metagenomics
  • time series
  • Lotka-Volterra model
  • microbial interaction
  • 16S rRNA
  • mutualism
  • competition
  • parasitism
  • predation
  • commensalism
  • amensalism
  • MetaMIS

Project Samples

MetaMIS_platform MetaMIS_panel2 MetaMIS_panel2 MetaMIS_panel3 MetaMIS_panel4 MetaMIS_panel5

Project Activity

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Categories

Simulation

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Additional Project Details

Operating Systems

Mac, Windows

Programming Language

MATLAB

Related Categories

MATLAB Simulation Software

Registered

2015-12-18
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