INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data.

To download source code, reference manual and test case, please go to 'Files'.

Also refer to 'Wiki' for details.

Features

  • High sensitivity and specificity
  • Exact fusion junctions and genomic breakpoints
  • Fast split-read mapping algorithm based on Burrows-Wheeler transform

Project Samples

INTEGRATE Screenshot 1

Project Activity

See All Activity >

Categories

Bio-Informatics

License

GNU General Public License version 3.0 (GPLv3)

Follow INTEGRATE

INTEGRATE Web Site

Other Useful Business Software
MongoDB Atlas runs apps anywhere Icon
MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of INTEGRATE!

Additional Project Details

Registered

2014-05-09
Report inappropriate content