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Home / bioimagexd / BioImageXD 1.0 RC1
Name Modified Size InfoDownloads / Week
Parent folder
README_RC1.txt 2011-11-06 2.6 kB
BioImageXDx64-1.0RC1.exe 2011-11-06 45.3 MB
BioImageXD-1.0RC1-Linux.tar.gz 2011-11-06 111.1 MB
BioImageXD-1.0RC1-OSX.tar.gz 2011-11-05 119.8 MB
BioImageXD-1.0RC1.exe 2011-11-05 37.1 MB
Totals: 5 Items   313.3 MB 0
BioImageXD 1.0RC1 is the first release candidate of official version 1.0 release. This means that all functionality is final, but there might still be some bugs that we will fix before releasing version 1.0. If you find any bugs, please report those to our bug tracker.

We provide packages for 32 and 64-bit Windows (Xp, Vista, 7), 64-bit Linux and 64-bit Mac OSX 10.6. Windows packages are installers for automatic installation. To use Linux or Mac OSX package, first extract package and then read either readme_linux.txt or readme_osx.txt for instructions to set LD_LIBRARY_PATH or DYLD_LIBRARY_PATH. Also Linux package needs Python 2.6 and wxPython 2.8.x installed where as Mac OSX package needs Python 2.7. Mac OSX 10.6 version might include more bugs than other packages. We plan to improve Mac version and also provide package for 10.7 (Lion) in coming months.

Changes since previous release (r1537):
- Versions for 64-bit Windows, 64-bit Linux and 64-bit Mac OSX 10.6.
- Getting started guide included in the software.
- Enhanced GUI functionality including descriptions and input/output image types for all filters.
- Support for 8/12/16/32 grayscale images, RGB images and 32/64-bit label images.
- MRC file format reader.
- Support for multipage TIFF files.
- Improved memory handling.
- Many fixed bugs.
- Updated libraries: VTK 5.6.1 and ITK 3.20.
- 3D visualization of multiple channels without grouping.
- Filters for deconvolution and mathematical generation of PSF.
- Possibility for FRAP analysis.
- Many new registrations filters.
- Fourier and Inverse Fourier transforms. Low and high pass filters.
- Filter to remove background gradient from images.
- Difference of Gaussians filter for improved spot detection.
- Possibility to filter objects by size, border connection and roundness.

New filters in procedure list task (21):
  * Mean (smoothing)
  * PSF generation (deconvolution)
  * Iterative deconvolution (deconvolution)
  * Difference of Gaussians (spot detection)
  * Binary thinning (3D skeleton of binary data)
  * FFT, Inverse FFT, Butterworth low pass, Butterworth high pass, Ideal low pass, Ideal high pass
  * Non-uniform illumination correction (to remove background gradient)
  * Filter objects (remove labeled objects)
  * FRAP analysis
  * Versor rigid registration, Rigid registration 2D, Deformable registration, Translation registration 2D, Slices translation registration
  * Combine images (compute single image from two)
  * Extract components (extract components of RGB image)
Source: README_RC1.txt, updated 2011-11-06