bam2rpkm

Generate RPKM values from SAM or BAM format files.

Project Activity

See All Activity >

Follow bam2rpkm

bam2rpkm Web Site

Other Useful Business Software

Enterprise-grade ITSM, for every business

Give your IT, operations, and business teams the ability to deliver exceptional services—without the complexity.

Freshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.

Try it Free

Rate This Project

User Ratings

5.0 out of 5 stars

★★★★★

★★★★

★★★

★★

★

ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

design 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

support 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 0 / 5

User Reviews

Filter Reviews:

All

oid-4072040 Posted 2012-12-03

hi.. I recently came across this tool and I used it to generate RPKM vales on my sorted bam file according to the usage. Below is the code. But the out file generated is empty. I don't know whats wrongs with it. I tried all possible options. any suggestions on what might be the problem ??? $ java -jar bam2rpkm-0.06.jar -i ../al.sorted.bam -f ../Homo_sapiens.GRCh37.69.gtf -o aln Total time: 17 minutes 42 seconds

Additional Project Details

Registered

2011-08-18

Report inappropriate content