Tagger / News: Recent posts

The tagger and fetchGWI tools provide a rapid mean to search for exact or near
exact matches between short oligonucleotide queries and sequence databases
comprising entire genomes or transcriptomes.

This release introduces a change in the index format that both improves search speed and reduces the size of the index file.

Compilation on 32-bit machine has been made easier.

The tagger and fetchGWI tools provide a rapid mean to search for exact or near
exact matches between short oligonucleotide queries and sequence databases
comprising entire genomes or transcriptomes.

Ambiguous nucleotides can be specified in the queries. It is also possible to specify the number of allowed mismatches.

A version of fetchGWI and tagger has been made available to accompany a paper submission for WABI '06