Activity for SNPTools
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Jin Yu posted a comment on ticket #5
Hi, Ashwani The next step is GL. Please check the wiki: https://sourceforge.net/p/snptools/wiki/Best%20practices%20of%20integrated%20SNP%20analysis/...
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Yi Wang posted a comment on ticket #5
hi all: please be careful, the following command does not works correctly, as hg19.fa...
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Zhuoyi Huang posted a comment on ticket #5
You did not post the reads data section but only the BAM header. From this, I guess...
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Hi Ashwani, Can you check if the 3rd field in your BAM files is "19" or "chr19"?...
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Ashwani, "chr" is actually "$chr", it is 19 in your case.
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Ashwani, does the ebd files have the right path?
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Anonymous created ticket #5
Segmentation fault : Failed to read ebd file by varisite
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Anonymous created ticket #4
GL Format
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Best practices with SNPTools
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tweak makefile to make it compatible to latest gcc
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