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#170 SWC file which does not load into MOOSE

async13
open
nobody
swc (1)
5
2015-07-07
2015-07-07
dilawars
No

Attached file does not load into MOOSE.

Executing model SWCDATA/ascoli+barrionuevo/CNG_version/85-LM-HiDe.CNG.swc
root        : INFO     Loading into MOOSE
In doLoadModel for SWC
ReadSwc::validate() failed: 
NumSegs = 14998, numStart = 1, orphans = 0, badIndex = 0, badRadius = 3, numBranches = 0
ReadSwc: SWCDATA/ascoli+barrionuevo/CNG_version/85-LM-HiDe.CNG.swc  : NumSegs = 14998, bad = 0, Validated = 0, numBranches = 0
ReadSwc::diagnostics: undef :   0
ReadSwc::diagnostics: soma :    3
ReadSwc::diagnostics: axon :    13227
ReadSwc::diagnostics: dend :    1768
ReadSwc::diagnostics: apical :  0
ReadSwc::diagnostics: dend_f :  0
ReadSwc::diagnostics: dend_e :  0
ReadSwc::diagnostics: custom :  0
ReadSwc::diagnostics: bad : 0
ReadSwc::diagnostics: undef :   0
ReadSwc::diagnostics: axon_f :  0
ReadSwc::diagnostics: axon_e :  0
ReadSwc::diagnostics: apical_f :    0
ReadSwc::diagnostics: apical_e :    0
Error: Neuron::buildSegmentTree( /library[0]/elec ): 
        Valid neuronal model not found.
Error: Neuron::buildSegmentTree( /model[0]/elec ): 
        Valid neuronal model not found.
Error: rdesigneur: model build failed:  'installCellFromProto: No soma found'

May be file is corrupt. If not, then it would be a good test model to check the SWC loader.

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