KAnalyze 2.0.0 has been released!

• Large k-mers
  • Tested up to 3000-mer
• Removed GUI from count module
• Default output format is auto
  • Was raw
  • --input is raw if -f is auto
• Output format "int" is gone
  • Use "dec"
• New output format: IKC (indexed k-mer count)
  • Query k-mers in sequence order almost as fast as loading into memory
  • Requires a minimizer to be set.
• Reverse-complement "duplicate" does not count self-complementary k-mers
  • Use "forceduplicate" for old behavior
• Minimizers
  • -m ikc
  • --minsize > 0 required
• FASTA format writer: No space after ">"
• Command-line options
  • -t: Changed from --temploc to --threads
  • -g (--segsize) can accept decimal values (e.g. 1.5G)