Public_Data_Sets

Human Genomes

Year Paper Who Data Accession

2007
Levy et al.
J. Craig Venter
Sanger, 7.5x
Unknown

2008
Wheeler et al.
James Watson
454, 7.4x
Unknown

2008
Bentley et al.
Yoruban African (YRI, sample NA18507)
Illumina, 30x 35bp
SRA000271

2008
Wang et al.
Asian male (YH)
Illumina, 36x 35bp
ERA000005

2008
Ley et al.
Leukaemia genome (AML)
Illumina, 32x + 14x, 32-35bp
Unknown

2009
Drmanac et al.
Caucasian male, Yoruban female, Lymphoblast cells
Complete Genomics
Unknown

2009
Pushkarev et al.
Unknown
Helicos, 28x 32bp
SRA009216

2009
Ahn et al.
Korean (SJK)
Illumina, 29x 75bp
SRA008175

2009
Kim et al.
Korean (AK1)
Illumina, 28x 36-106bp
SRA008370

2010
Baranzini et al.
Genome, Epigenome, RNAseq, of twins with MS
Illumina, 21x, 28x
dbGaP

2010
Gnerre et al.
YH Asian
Illumina, 100x 100bp
SRP003680 Human NA12878 Genome on Illumina

Other Genomes

Year What Paper Data Accession

2007
E. coli K12 substrain MG1655
Unknown
Illumina >100x 36bp
SRX000429

2008
Woolly Mammoth
Miller et al.
454
<http://mammoth.psu.edu/>

2010
Giant Panda
Li et al.
Illumina, 73x, 52bp
SRA009203

2010
Neandertal Genome
Green et al.
454, Illumina
Unknown

2010
Extinct Palaeo-Eskimo
Rasmussen et al.
Illumina, 20x 70bp
SRA010102