iCn3D Activity

Web-based protein structure viewer and analysis tool

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Activity for iCn3D

• 2 months ago

  iCn3D released /v3.47.1/Showed the count of hydrogen bonds over time for MD trajectories. source code.zip

• 2 months ago

  iCn3D released /v3.47.1/Showed the count of hydrogen bonds over time for MD trajectories. source code.tar.gz

• 3 months ago

  iCn3D released /v3.47.0b/v3.47.0b source code.zip

• 3 months ago

  iCn3D released /v3.47.0b/v3.47.0b source code.tar.gz

• 3 months ago

  iCn3D released /v3.47.0/v3.47.0 source code.zip

• 3 months ago

  iCn3D released /v3.47.0/v3.47.0 source code.tar.gz

• 4 months ago

  iCn3D released /v3.46.0/v3.46.0 source code.tar.gz

• 4 months ago

  iCn3D released /v3.46.0/v3.46.0 source code.zip

• 4 months ago

  iCn3D released /v3.45.5/v3.45.5 source code.tar.gz

• 4 months ago

  iCn3D released /v3.45.5/v3.45.5 source code.zip

• 5 months ago

  iCn3D released /v3.45.4/AlphaFold models were upgraded from version 4 to version 6, e.g., AF-Q12860-F1-model_v6.pdb. source code.zip

• 5 months ago

  iCn3D released /v3.45.4/AlphaFold models were upgraded from version 4 to version 6, e.g., AF-Q12860-F1-model_v6.pdb. source code.tar.gz

• 6 months ago

  iCn3D released /v3.45.3/Enabled to input long PDB IDs starting with pdb_0000. Fixed sequence alignment view and camera viewpoint-related issues. source code.zip

• 6 months ago

  iCn3D released /v3.45.3/Enabled to input long PDB IDs starting with pdb_0000. Fixed sequence alignment view and camera viewpoint-related issues. source code.tar.gz

• 7 months ago

  iCn3D released /v3.45.2/Removed the line _global.THREE = require(_three_)_ in iCn3D node.js scripts since three.js has been compiled into icn3d.js since iCn3D 3.44.0. source code.zip

• 7 months ago

  iCn3D released /v3.45.2/Removed the line _global.THREE = require(_three_)_ in iCn3D node.js scripts since three.js has been compiled into icn3d.js since iCn3D 3.44.0. source code.tar.gz

• 8 months ago

  iCn3D released /v3.45.1/Fixed bugs in assigning specific template and VAST+ alignment sequence display. source code.zip

• 8 months ago

  iCn3D released /v3.45.1/Fixed bugs in assigning specific template and VAST+ alignment sequence display. source code.tar.gz

• 9 months ago

  iCn3D released /v3.45.0/v3.45.0 source code.zip

• 9 months ago

  iCn3D released /v3.45.0/v3.45.0 source code.tar.gz

• 9 months ago

  iCn3D released /v3.44.2/Enabled to drag and drop to open mmCIF, PDB, PNG, and BCF files. source code.tar.gz

• 9 months ago

  iCn3D released /v3.44.2/Enabled to drag and drop to open mmCIF, PDB, PNG, and BCF files. source code.zip

• 9 months ago

  iCn3D released /v3.44.1/Output BCF viewpoint file via the menu _File _ Save File _ BCF Viewpoint_. source code.zip

• 9 months ago

  iCn3D released /v3.44.1/Output BCF viewpoint file via the menu _File _ Save File _ BCF Viewpoint_. source code.tar.gz

• 10 months ago

  iCn3D released /v3.44.0/Upgraded three.js to version 177 and compiled three.js directly into iCn3D library. No need to include three.js as a separate library. source code.zip

• 10 months ago

  iCn3D released /v3.44.0/Upgraded three.js to version 177 and compiled three.js directly into iCn3D library. No need to include three.js as a separate library. source code.tar.gz

• 10 months ago

  iCn3D released /v3.43.0/Replaced Google Firebase dynamic links with our own short URL service. source code.zip

• 10 months ago

  iCn3D released /v3.43.0/Replaced Google Firebase dynamic links with our own short URL service. source code.tar.gz

• 11 months ago

  iCn3D released /v3.42.0/README.md

• 11 months ago

  iCn3D released /v3.42.0/Allowed to input MSA files to show both MSA and structure alignment_ added the _Stereo View_ allowed to save canvas video_ added _NCBI_ logo. source code.zip

• 11 months ago

  iCn3D released /v3.42.0/Allowed to input MSA files to show both MSA and structure alignment_ added the _Stereo View_ allowed to save canvas video_ added _NCBI_ logo. source code.tar.gz

• 12 months ago

  iCn3D released /v3.41.0/v3.41.0 source code.zip

• 12 months ago

  iCn3D released /v3.41.0/v3.41.0 source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.6/Fixed the electron density map after switching from DSN6 to volume data from PDBe. source code.zip

• 1 year ago

  iCn3D released /v3.40.6/Fixed the electron density map after switching from DSN6 to volume data from PDBe. source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.5/Fixed the URL for the _Side by Side_ view. source code.zip

• 1 year ago

  iCn3D released /v3.40.5/Fixed the URL for the _Side by Side_ view. source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.4/Fixed DelPhi potential calculations for chains with more than one letter. source code.zip

• 1 year ago

  iCn3D released /v3.40.4/Fixed DelPhi potential calculations for chains with more than one letter. source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.3/Collections update - fixed gz and zip functionality and collections parsing. source code.zip

• 1 year ago

  iCn3D released /v3.40.3/Collections update - fixed gz and zip functionality and collections parsing. source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.2/Collections update - fixed gz and zip functionality and collections parsing. source code.zip

• 1 year ago

  iCn3D released /v3.40.2/Collections update - fixed gz and zip functionality and collections parsing. source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.0/v3.40.0 source code.zip

• 1 year ago

  iCn3D released /v3.40.0/v3.40.0 source code.tar.gz

• 1 year ago

  iCn3D released /v3.40.0/README.md

• 1 year ago

  iCn3D released /v3.39.0/Collections update - added multi file format support for zip, command history and JSON export, gz_ent file support. source code.zip

• 1 year ago

  iCn3D released /v3.39.0/Collections update - added multi file format support for zip, command history and JSON export, gz_ent file support. source code.tar.gz

• 1 year ago

  iCn3D released /v3.38.1/Improved the conversion of chemical SMILES to 3D structure by showing double bonds. source code.zip

• 1 year ago

  iCn3D released /v3.38.1/Improved the conversion of chemical SMILES to 3D structure by showing double bonds. source code.tar.gz

• 1 year ago

  iCn3D released /v3.38.0/Enabled to convert chemical SMILES to 3D structure via the menu _File _ Retrieve by ID _ Chemical SMILES_. source code.zip

• 1 year ago

  iCn3D released /v3.38.0/Enabled to convert chemical SMILES to 3D structure via the menu _File _ Retrieve by ID _ Chemical SMILES_. source code.tar.gz

• 1 year ago

  iCn3D released /v3.37.0/Added a menu _Style _ Clashed Residues _ Hide_ to hide clashed residues. source code.zip

• 1 year ago

  iCn3D released /v3.37.0/Added a menu _Style _ Clashed Residues _ Hide_ to hide clashed residues. source code.tar.gz

• 1 year ago

  iCn3D released /v3.36.1/Fixed an issue related to previous chain IDs such as _A_1_ (changed to _A1_) in previous sharable links. source code.zip

• 1 year ago

  iCn3D released /v3.36.1/Fixed an issue related to previous chain IDs such as _A_1_ (changed to _A1_) in previous sharable links. source code.tar.gz

• 1 year ago

  iCn3D released /v3.36.0/Allowed to load multiple iCn3D PNG images. source code.zip

• 1 year ago

  iCn3D released /v3.36.0/Allowed to load multiple iCn3D PNG images. source code.tar.gz

• 1 year ago

  iCn3D released /v3.35.0/Retrieved updated ClinVar annotations directly from NCBI ClinVar database. source code.zip

• 1 year ago

  iCn3D released /v3.35.0/Retrieved updated ClinVar annotations directly from NCBI ClinVar database. source code.tar.gz

• 2 years ago

  iCn3D released /v3.34.1/Switched VAST search alignment from backend to dynamic alignment in iCn3D. source code.zip

• 2 years ago

  iCn3D released /v3.34.1/Switched VAST search alignment from backend to dynamic alignment in iCn3D. source code.tar.gz

• 2 years ago

  iCn3D released /v3.34.0/Show atom details for the interaction of one ligand_residue with protein via the menu _Analysis _ Interaction_ and then the button _2D Interaction for One Ligand_Residue_. source code.zip

• 2 years ago

  iCn3D released /v3.34.0/Show atom details for the interaction of one ligand_residue with protein via the menu _Analysis _ Interaction_ and then the button _2D Interaction for One Ligand_Residue_. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.3/Switch electron density data from RCSB DSN6 to PDBe Density Server. source code.zip

• 2 years ago

  iCn3D released /v3.33.3/Switch electron density data from RCSB DSN6 to PDBe Density Server. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.2/Enabled to measure angles between sets in the menu _Analysis _ Angle_. source code.zip

• 2 years ago

  iCn3D released /v3.33.2/Enabled to measure angles between sets in the menu _Analysis _ Angle_. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.0/Users can use iCn3D to detect Ig domains for any structures and assign IgStrand reference numbers for each residue. The instruction is at https_www.ncbi.nlm.nih.gov_Structure_icn3d_icn3d.html#igrefnum. source code.zip

• 2 years ago

  iCn3D released /v3.33.1/Draw coils for the whole structure with zero radius for the secondary structure parts. source code.zip

• 2 years ago

  iCn3D released /v3.33.1/Draw coils for the whole structure with zero radius for the secondary structure parts. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.0/Users can use iCn3D to detect Ig domains for any structures and assign IgStrand reference numbers for each residue. The instruction is at https_www.ncbi.nlm.nih.gov_Structure_icn3d_icn3d.html#igrefnum. source code.tar.gz

• 2 years ago

  iCn3D released /v3.32.0/Allowed to load multiple mmCIF text files, which could contain multiple structures separated by _ENDMDL_n_. source code.zip

• 2 years ago

  iCn3D released /v3.32.0/Allowed to load multiple mmCIF text files, which could contain multiple structures separated by _ENDMDL_n_. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.1/Draw coils for the whole structure with zero radius for the secondary structure parts. source code.zip

• 2 years ago

  iCn3D released /v3.33.1/Draw coils for the whole structure with zero radius for the secondary structure parts. source code.tar.gz

• 2 years ago

  iCn3D released /v3.33.0/Users can use iCn3D to detect Ig domains for any structures and assign IgStrand reference numbers for each residue. The instruction is at https_www.ncbi.nlm.nih.gov_Structure_icn3d_icn3d.html#igrefnum. source code.zip

• 2 years ago

  iCn3D released /v3.33.0/Users can use iCn3D to detect Ig domains for any structures and assign IgStrand reference numbers for each residue. The instruction is at https_www.ncbi.nlm.nih.gov_Structure_icn3d_icn3d.html#igrefnum. source code.tar.gz

• 2 years ago

  iCn3D released /v3.32.0/Allowed to load multiple mmCIF text files, which could contain multiple structures separated by _ENDMDL_n_. source code.zip

• 2 years ago

  iCn3D released /v3.32.0/Allowed to load multiple mmCIF text files, which could contain multiple structures separated by _ENDMDL_n_. source code.tar.gz

• 2 years ago

  iCn3D released /v3.31.4/Released Ig templates for assigning reference numbers. source code.zip

• 2 years ago

  iCn3D released /v3.31.4/Released Ig templates for assigning reference numbers. source code.tar.gz

• 2 years ago

  iCn3D released /v3.31.3/Jack Lin fixed some issues in loading a collection file. source code.zip

• 2 years ago

  iCn3D released /v3.31.3/Jack Lin fixed some issues in loading a collection file. source code.tar.gz

• 2 years ago

  iCn3D released /v3.31.2/v3.31.2 source code.zip

• 2 years ago

  iCn3D released /v3.31.2/v3.31.2 source code.tar.gz

• 2 years ago

  iCn3D released /v3.31.2/README.md

• 2 years ago

  iCn3D released /v3.31.1/Switched from _let xArray = atom_site.getColumn(_Cartn_x_).data_ to _let xArray = atom_site.getColumn(_Cartn_x_)_ when accessing data from Binary or text CIF data. source code.zip

• 2 years ago

  iCn3D released /v3.31.1/Switched from _let xArray = atom_site.getColumn(_Cartn_x_).data_ to _let xArray = atom_site.getColumn(_Cartn_x_)_ when accessing data from Binary or text CIF data. source code.tar.gz

• 2 years ago

  iCn3D released /v3.31.0/Replaced MMTF data with Binary CIF data. Both _mmtfid_ and _bcifid_ inputs get the Binary CIF data. source code.zip

• 2 years ago

  iCn3D released /v3.31.0/Replaced MMTF data with Binary CIF data. Both _mmtfid_ and _bcifid_ inputs get the Binary CIF data. source code.tar.gz

• 2 years ago

  iCn3D released /v3.30.1/Fixed 3D domain summary view. source code.zip

• 2 years ago

  iCn3D released /v3.30.1/Fixed 3D domain summary view. source code.tar.gz

• 2 years ago

  iCn3D released /v3.30.0/Calculate 3D domains on-the-fly and show 3D domains even when only one domain is available. source code.zip

• 2 years ago

  iCn3D released /v3.30.0/Calculate 3D domains on-the-fly and show 3D domains even when only one domain is available. source code.tar.gz

• 2 years ago

  iCn3D released /v3.29.5/v3.29.5 source code.zip

• 2 years ago

  iCn3D released /v3.29.5/v3.29.5 source code.tar.gz

• 2 years ago

  iCn3D released /v3.29.5/README.md

• 2 years ago

  iCn3D released /v3.29.4/v3.29.4 source code.zip

• 2 years ago

  iCn3D released /v3.29.4/v3.29.4 source code.tar.gz

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