Best Open Source Flex Bio-Informatics Software

Flex Bio-Informatics Software

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Browse free open source Flex Bio-Informatics Software and projects below. Use the toggles on the left to filter open source Flex Bio-Informatics Software by OS, license, language, programming language, and project status.

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1

GNomEx

A Genomic LIMS and Data Repository

Our source code is now on GitHub: https://github.com/hci-gnomex/gnomex. Please refer to GitHub for the latest code. GNomEx is Genomic LIMS and Data Repository. It holds annotated experiments and downstream analysis and serves data tracks to popular genome browsers such as IGB, IGV, and UCSC genome browser. The LIMS handles all aspects of the experiment from order through results delivery. Experiment platforms supported include Illumina HiSeq, MiSeq, iScan, ABI Sanger sequencing, Affy and Agilent Microarrays, Sequenom MassArray and Bioanalyzer. GNomEx is a web application with a Flash client user interface and a Java backend that runs on Apache Tomcat. MySQL is used for the database, although any modern RDBMS can be used.

4 Reviews

Downloads: 0 This Week

Last Update: 2016-10-31
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2

MGFp

MGFp is open parser implementation for the Mascot Generic Format (MGF). It uses bison/flex to define a formal grammar and provides the necessary C++ adapter classes. The software is provided under a BSD license. Development on SF.net has ceased. You can find the project at http://kirchnerlab.github.com/libmgf/

Downloads: 0 This Week

Last Update: 2013-04-26
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3

dnasynth

Application to optimize DNA sequences coding protein to put in in the different organizm (f.e. human protein in E.Coli). It proposes the optimal cutting places to connect many shorter fragments into bigger one using ligaze.

Downloads: 0 This Week

Last Update: 2017-11-15
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4

fasta-utils

A set of command-line utilities for annotating and manipulating DNA sequences in FASTA format. Generate restriction fragments, ORF's, translations, reverse complement, etc. . - and tie it all together with Unix pipes for complete virtual cloning.

Downloads: 0 This Week

Last Update: 2013-05-15
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